Structural Similarities for the Entities in PDB 1MJG

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-13-2017

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D

Description: CARBON MONOXIDE DEHYDROGENASE BETA SUBUNIT protein | Length: 674

No structure alignment results are available for 1MJG.A, 1MJG.B, 1MJG.C, 1MJG.D explicitly.

These chains are represented by chain 4UDX.X which has more than 40% sequence identity.

Show structure comparison results

  Loading...

View how chain 1MJG.D compares with the representative chain PDP:4UDXXa. Select a comparison method:


Entity #2 | Chains M,N,O,P

Description: Carbon monoxide dehydrogenase alpha subunit protein | Length: 729

No structure alignment results are available for 1MJG.M, 1MJG.N, 1MJG.O, 1MJG.P explicitly.

These chains are represented by chain 1OAO.c which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 1MJG.P compares with the representative chain d1oaoc_. Select a comparison method:


References