Structural Similarities for the Entities in PDB 1MHH

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Mar-14-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C

Description: Fab, light chain protein | Length: 220

No structure alignment results are available for 1MHH.A, 1MHH.C explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

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View how chain 1MHH.C compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #2 | Chains B,D

Description: Fab, heavy chain protein | Length: 217

No structure alignment results are available for 1MHH.B, 1MHH.D explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

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View how chain 1MHH.D compares with the representative chain PDP:4NZULa. Select a comparison method:


Entity #3 | Chains E,F

Description: protein L domain C protein | Length: 63

No structure alignment results are available for 1MHH.E, 1MHH.F explicitly.

These chains are represented by chain 4HJG.E which has more than 95% sequence identity.

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View how chain 1MHH.F compares with the representative chain PDP:4HJGEa. Select a comparison method:


References