Structural Similarities for the Entities in PDB 1MF8

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: CALMODULIN-DEPENDENT CALCINEURIN A SUBUNIT, ALPHA ISOFORM protein | Length: 373

No structure alignment results are available for 1MF8.A explicitly.

It is represented by chain 4F0Z.A which is 100% sequence identical.

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View how chain 1MF8.A compares with the representative chain PDP:4F0ZAa. Select a comparison method:


Entity #2 | Chains B

Description: CALCINEURIN B SUBUNIT ISOFORM 1 protein | Length: 170

No structure alignment results are available for 1MF8.B explicitly.

It is represented by chain 4F0Z.B which is 100% sequence identical.

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View how chain 1MF8.B compares with the representative chain PDP:4F0ZBa. Select a comparison method:


Entity #3 | Chains C

Description: PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A protein | Length: 165

No structure alignment results are available for 1MF8.C explicitly.

It is represented by chain 2WFI.A which has more than 50% sequence identity.

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View how chain 1MF8.C compares with the representative chain PDP:2WFIAa. Select a comparison method:


Entity #4 | Chains D

Description: CYCLOSPORIN A protein | Length: 11

This entity is too short to be considered for the all vs. all structure alignments.


References