Structural Similarities for the Entities in PDB 1LTA

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains D,E,F,G,H

Description: HEAT-LABILE ENTEROTOXIN, SUBUNIT B protein | Length: 103

No structure alignment results are available for 1LTA.D, 1LTA.E, 1LTA.F, 1LTA.G, 1LTA.H explicitly.

These chains are represented by chain 5ELB.A which has more than 90% sequence identity.

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View how chain 1LTA.H compares with the representative chain PDP:5ELBAa. Select a comparison method:


Entity #2 | Chains A

Description: HEAT-LABILE ENTEROTOXIN, SUBUNIT A protein | Length: 188

No structure alignment results are available for 1LTA.A explicitly.

It is represented by chain 2A5D.b which has more than 70% sequence identity.

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View how chain 1LTA.A compares with the representative chain d2a5db1. Select a comparison method:


Entity #3 | Chains C

Description: HEAT-LABILE ENTEROTOXIN, SUBUNIT A protein | Length: 49

No structure alignment results are available for 1LTA.C explicitly.

It is represented by chain 1LTS.. which is 100% sequence identical.

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