Structural Similarities for the Entities in PDB 1LK6

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Mar-28-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains I,L

Description: antithrombin-III protein | Length: 432

No structure alignment results are available for 1LK6.I, 1LK6.L explicitly.

These chains are represented by chain 3KCG.I which has more than 95% sequence identity.

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View how chain 1LK6.L compares with the representative chain PDP:3KCGIa. Select a comparison method:


Entity #2 | Chains C

Description: antithrombin P14-P9 peptide protein | Length: 7

This entity is too short to be considered for the all vs. all structure alignments.


Entity #3 | Chains D

Description: exogenous tripeptide formyl-MLF protein | Length: 3

This entity is too short to be considered for the all vs. all structure alignments.


References