Structural Similarities for the Entities in PDB 1LK3

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

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Entity #1 | Chains A,B

Description: Interleukin-10 protein | Length: 160

No structure alignment results are available for 1LK3.A, 1LK3.B explicitly.

These chains are represented by chain 1ILK.a which has more than 95% sequence identity.

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Entity #2 | Chains L,M

Description: 9D7 Light Chain protein | Length: 210

No structure alignment results are available for 1LK3.L, 1LK3.M explicitly.

These chains are represented by chain 4NZU.L which has more than 70% sequence identity.

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Entity #3 | Chains H,I

Description: 9D7 Heavy Chain protein | Length: 219

No structure alignment results are available for 1LK3.H, 1LK3.I explicitly.

These chains are represented by chain 4NZU.L which has more than 50% sequence identity.

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References