Structural Similarities for the Entities in PDB 1LB5

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Feb-14-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: TNF receptor-associated factor 6 protein | Length: 160

No structure alignment results are available for 1LB5.A explicitly.

It is represented by chain 1LB6.a which is 100% sequence identical.

Show structure comparison results


View how chain 1LB5.A compares with the representative chain d1lb6a_. Select a comparison method:

Entity #2 | Chains B

Description: receptor activator of nuclear factor-kappa B protein | Length: 8

This entity is too short to be considered for the all vs. all structure alignments.