Structural Similarities for the Entities in PDB 1L1O

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,D

Description: Replication protein A 14 kDa subunit protein | Length: 121

No structure alignment results are available for 1L1O.A, 1L1O.D explicitly.

These chains are represented by chain XXXX.null which is 100% sequence identical.

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View how chain 1L1O.D compares with the representative chain xxxx. Select a comparison method:


Entity #2 | Chains B,E

Description: Replication protein A 32 kDa subunit protein | Length: 128

No structure alignment results are available for 1L1O.B, 1L1O.E explicitly.

These chains are represented by chain XXXX.null which is 100% sequence identical.

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View how chain 1L1O.E compares with the representative chain xxxx. Select a comparison method:


Entity #3 | Chains C,F

Description: Replication protein A 70 kDa DNA-binding subunit protein | Length: 181

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References