Structural Similarities for the Entities in PDB 1KYI

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,S,T,U,V,W,X

Description: ATP-dependent hsl protease ATP-binding subunit hslU protein | Length: 444

No structure alignment results are available for 1KYI.A, 1KYI.B, 1KYI.C, 1KYI.D, 1KYI.E, 1KYI.F, 1KYI.S, 1KYI.T, 1KYI.U, 1KYI.V, 1KYI.W, 1KYI.X explicitly.

These chains are represented by chain 1G41.a which is 100% sequence identical.

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View how chain 1KYI.X compares with the representative chain d1g41a_. Select a comparison method:


Entity #2 | Chains G,H,I,J,K,L,M,N,O,P,Q,R

Description: ATP-dependent protease hslV protein | Length: 174

No structure alignment results are available for 1KYI.G, 1KYI.H, 1KYI.I, 1KYI.J, 1KYI.K, 1KYI.L, 1KYI.M, 1KYI.N, 1KYI.O, 1KYI.P, 1KYI.Q, 1KYI.R explicitly.

These chains are represented by chain 1G3K.a which is 100% sequence identical.

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View how chain 1KYI.R compares with the representative chain d1g3ka_. Select a comparison method:


References