Structural Similarities for the Entities in PDB 1KN0

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H,I,J,K

Description: Rad52 protein | Length: 212

No structure alignment results are available for 1KN0.A, 1KN0.B, 1KN0.C, 1KN0.D, 1KN0.E, 1KN0.F, 1KN0.G, 1KN0.H, 1KN0.I, 1KN0.J, 1KN0.K explicitly.

These chains are represented by chain 5JRB.A which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1KN0.K compares with the representative chain PDP:5JRBAa. Select a comparison method:


References