Structural Similarities for the Entities in PDB 1KN0

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Mar-28-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F,G,H,I,J,K

Description: Rad52 protein | Length: 212

No structure alignment results are available for 1KN0.A, 1KN0.B, 1KN0.C, 1KN0.D, 1KN0.E, 1KN0.F, 1KN0.G, 1KN0.H, 1KN0.I, 1KN0.J, 1KN0.K explicitly.

These chains are represented by chain 5JRB.A which has more than 95% sequence identity.

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View how chain 1KN0.K compares with the representative chain PDP:5JRBAa. Select a comparison method:


References