Structural Similarities for the Entities in PDB 1KLF

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-20-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C,E,G,I,K,M,O

Description: CHAPERONE PROTEIN FIMC protein | Length: 205

No structure alignment results are available for 1KLF.A, 1KLF.C, 1KLF.E, 1KLF.G, 1KLF.I, 1KLF.K, 1KLF.M, 1KLF.O explicitly.

These chains are represented by chain 3BWU.c which has more than 95% sequence identity.

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View how chain 1KLF.O compares with the representative chain d3bwuc1. Select a comparison method:


Entity #2 | Chains B,D,F,H,J,L,N,P

Description: FIMH PROTEIN protein | Length: 279

No structure alignment results are available for 1KLF.B, 1KLF.D, 1KLF.F, 1KLF.H, 1KLF.J, 1KLF.L, 1KLF.N, 1KLF.P explicitly.

These chains are represented by chain 4XO9.A which is 100% sequence identical.

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View how chain 1KLF.P compares with the representative chain PDP:4XO9Aa. Select a comparison method:


References