Structural Similarities for the Entities in PDB 1KIU

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C,E,G,I,K,M,O

Description: CHAPERONE PROTEIN FimC protein | Length: 205

No structure alignment results are available for 1KIU.A, 1KIU.C, 1KIU.E, 1KIU.G, 1KIU.I, 1KIU.K, 1KIU.M, 1KIU.O explicitly.

These chains are represented by chain 3BWU.c which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 1KIU.O compares with the representative chain d3bwuc1. Select a comparison method:


Entity #2 | Chains B,D,F,H,J,L,N,P

Description: FimH PROTEIN protein | Length: 279

No structure alignment results are available for 1KIU.B, 1KIU.D, 1KIU.F, 1KIU.H, 1KIU.J, 1KIU.L, 1KIU.N, 1KIU.P explicitly.

These chains are represented by chain 4XO9.A which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 1KIU.P compares with the representative chain PDP:4XO9Aa. Select a comparison method:


References