Structural Similarities for the Entities in PDB 1K8K

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-20-2017

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: ACTIN-LIKE PROTEIN 3 protein | Length: 418

  Loading...

Entity #2 | Chains B

Description: ACTIN-LIKE PROTEIN 2 protein | Length: 394

No structure alignment results are available for 1K8K.B explicitly.

It is represented by chain 4CBU.A which has more than 40% sequence identity.

Show structure comparison results

  Loading...

View how chain 1K8K.B compares with the representative chain PDP:4CBUAa. Select a comparison method:


Entity #3 | Chains C

Description: ARP2/3 COMPLEX 41 KDA SUBUNIT protein | Length: 372

  Loading...

Entity #4 | Chains D

Description: ARP2/3 COMPLEX 34 KDA SUBUNIT protein | Length: 300

  Loading...

Entity #5 | Chains E

Description: ARP2/3 COMPLEX 21 KDA SUBUNIT protein | Length: 178

  Loading...

Entity #6 | Chains F

Description: ARP2/3 COMPLEX 20 KDA SUBUNIT protein | Length: 168

  Loading...

Entity #7 | Chains G

Description: ARP2/3 COMPLEX 16 KDA SUBUNIT protein | Length: 151

  Loading...

References