1I84

CRYO-EM STRUCTURE OF THE HEAVY MEROMYOSIN SUBFRAGMENT OF CHICKEN GIZZARD SMOOTH MUSCLE MYOSIN WITH REGULATORY LIGHT CHAIN IN THE DEPHOSPHORYLATED STATE. ONLY C ALPHAS PROVIDED FOR REGULATORY LIGHT CHAIN. ONLY BACKBONE ATOMS PROVIDED FOR S2 FRAGMENT.


Structural Similarities for the Entities in PDB 1I84

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-20-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains S,V

Description: SMOOTH MUSCLE MYOSIN HEAVY CHAIN protein | Length: 1184

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Entity #2 | Chains T,W

Description: SMOOTH MUSCLE MYOSIN ESSENTIAL LIGHT CHAIN protein | Length: 150

No structure alignment results are available for 1I84.T, 1I84.W explicitly.

These chains are represented by chain 1EXR.a which has more than 40% sequence identity.

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View how chain 1I84.W compares with the representative chain d1exra_. Select a comparison method:


Entity #3 | Chains U,Z

Description: SMOOTH MUSCLE MYOSIN REGULATORY LIGHT CHAIN protein | Length: 166

No structure alignment results are available for 1I84.U, 1I84.Z explicitly.

These chains are represented by chain 1EXR.a which has more than 40% sequence identity.

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View how chain 1I84.Z compares with the representative chain d1exra_. Select a comparison method:


References