Structural Similarities for the Entities in PDB 1HXY

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-13-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN protein | Length: 182

No structure alignment results are available for 1HXY.A explicitly.

It is represented by chain 4X5W.A which is 100% sequence identical.

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View how chain 1HXY.A compares with the representative chain PDP:4X5WAa. Select a comparison method:


Entity #2 | Chains B

Description: HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR-1 BETA CHAIN protein | Length: 190

No structure alignment results are available for 1HXY.B explicitly.

It is represented by chain 4X5W.B which is 100% sequence identical.

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View how chain 1HXY.B compares with the representative chain PDP:4X5WBa. Select a comparison method:


Entity #3 | Chains C

Description: HEMAGGLUTININ protein | Length: 13

This entity is too short to be considered for the all vs. all structure alignments.


Entity #4 | Chains D

Description: ENTEROTOXIN H protein | Length: 213

No structure alignment results are available for 1HXY.D explicitly.

It is represented by chain 1ENF.a which is 100% sequence identical.

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View how chain 1HXY.D compares with the representative chain d1enfa1. Select a comparison method:


References