Structural Similarities for the Entities in PDB 1HXM

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-20-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C,E,G

Description: GAMMA-DELTA T-CELL RECEPTOR protein | Length: 229

No structure alignment results are available for 1HXM.A, 1HXM.C, 1HXM.E, 1HXM.G explicitly.

These chains are represented by chain 4LFH.D which has more than 50% sequence identity.

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View how chain 1HXM.G compares with the representative chain PDP:4LFHDa. Select a comparison method:


Entity #2 | Chains B,D,F,H

Description: GAMMA-DELTA T-CELL RECEPTOR protein | Length: 242

No structure alignment results are available for 1HXM.B, 1HXM.D, 1HXM.F, 1HXM.H explicitly.

These chains are represented by chain 4LFH.G which has more than 50% sequence identity.

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View how chain 1HXM.H compares with the representative chain PDP:4LFHGa. Select a comparison method:


References