Structural Similarities for the Entities in PDB 1H2U

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: 80 KDA NUCLEAR CAP BINDING PROTEIN protein | Length: 723

No structure alignment results are available for 1H2U.A, 1H2U.B explicitly.

These chains are represented by chain 1H2T.c which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1H2U.B compares with the representative chain d1h2tc1. Select a comparison method:


Entity #2 | Chains X,Y

Description: 20 KDA NUCLEAR CAP BINDING PROTEIN protein | Length: 156

No structure alignment results are available for 1H2U.X, 1H2U.Y explicitly.

These chains are represented by chain 1H2V.z which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1H2U.Y compares with the representative chain d1h2vz_. Select a comparison method:


References