Structural Similarities for the Entities in PDB 1FLC

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C,E

Description: HAEMAGGLUTININ-ESTERASE-FUSION GLYCOPROTEIN protein | Length: 432

No structure alignment results are available for 1FLC.A, 1FLC.C, 1FLC.E explicitly.

These chains are represented by chain 5E65.A which has more than 50% sequence identity.

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View how chain 1FLC.E compares with the representative chain PDP:5E65Aa. Select a comparison method:


Entity #2 | Chains B,D,F

Description: HAEMAGGLUTININ-ESTERASE-FUSION GLYCOPROTEIN protein | Length: 175

No structure alignment results are available for 1FLC.B, 1FLC.D, 1FLC.F explicitly.

These chains are represented by chain 5E65.B which has more than 50% sequence identity.

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View how chain 1FLC.F compares with the representative chain PDP:5E65Ba. Select a comparison method:


References