Structural Similarities for the Entities in PDB 1FFU

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,D

Description: CUTS, IRON-SULFUR PROTEIN OF CARBON MONOXIDE DEHYDROGENASE protein | Length: 163

No structure alignment results are available for 1FFU.A, 1FFU.D explicitly.

These chains are represented by chain 1N62.a which has more than 50% sequence identity.

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View how chain 1FFU.D compares with the representative chain d1n62a1. Select a comparison method:


Entity #2 | Chains B,E

Description: CUTL, MOLYBDOPROTEIN OF CARBON MONOXIDE DEHYDROGENASE protein | Length: 803

No structure alignment results are available for 1FFU.B, 1FFU.E explicitly.

These chains are represented by chain 1N62.b which has more than 50% sequence identity.

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Entity #3 | Chains C,F

Description: CUTM, FLAVOPROTEIN OF CARBON MONOXIDE DEHYDROGENASE protein | Length: 287

No structure alignment results are available for 1FFU.C, 1FFU.F explicitly.

These chains are represented by chain 1N62.c which has more than 50% sequence identity.

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View how chain 1FFU.F compares with the representative chain d1n62c1. Select a comparison method:


References