Structural Similarities for the Entities in PDB 1FE1

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-13-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,J

Description: PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBA) protein | Length: 169

Entity #2 | Chains B,K

Description: PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBD) protein | Length: 174

Entity #3 | Chains C,L

Description: PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBC) protein | Length: 156

Entity #4 | Chains D,M

Description: PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBB) protein | Length: 155

Entity #5 | Chains E,N

Description: PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBE) protein | Length: 40

Entity #6 | Chains F,O

Description: PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBF) protein | Length: 30

Entity #7 | Chains G,P

Description: PROTEIN (PHOTOSYSTEM II: SUBUNIT UNKNOWN) protein | Length: 312

Entity #8 | Chains H,Q

Description: PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBO) protein | Length: 115

Entity #9 | Chains I,R

Description: PROTEIN (PHOTOSYSTEM II: SUBUNIT PSBV) protein | Length: 87

References