Structural Similarities for the Entities in PDB 1EZV

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I protein | Length: 430

No structure alignment results are available for 1EZV.A explicitly.

It is represented by chain 3CX5.a which has more than 95% sequence identity.

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Entity #10 | Chains X

Description: HEAVY CHAIN (VH) OF FV-FRAGMENT protein | Length: 127

No structure alignment results are available for 1EZV.X explicitly.

It is represented by chain 4UNU.A which has more than 40% sequence identity.

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Entity #11 | Chains Y

Description: LIGHT CHAIN (VL) OF FV-FRAGMENT protein | Length: 107

No structure alignment results are available for 1EZV.Y explicitly.

It is represented by chain 4UNU.A which has more than 50% sequence identity.

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Entity #2 | Chains B

Description: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN 2 protein | Length: 352

No structure alignment results are available for 1EZV.B explicitly.

It is represented by chain 3CX5.b which is 100% sequence identical.

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Entity #3 | Chains C

Description: CYTOCHROME B protein | Length: 385

No structure alignment results are available for 1EZV.C explicitly.

It is represented by chain 3CX5.c which has more than 95% sequence identity.

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Entity #4 | Chains D

Description: CYTOCHROME C1 protein | Length: 245

No structure alignment results are available for 1EZV.D explicitly.

It is represented by chain 3CX5.d which is 100% sequence identical.

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Entity #5 | Chains E

Description: UBIQUINOL-CYTOCHROME C REDUCTASE IRON-SULFUR SUBUNIT protein | Length: 185

No structure alignment results are available for 1EZV.E explicitly.

It is represented by chain 3CX5.e which is 100% sequence identical.

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Entity #6 | Chains H

Description: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 17 KD PROTEIN protein | Length: 74

No structure alignment results are available for 1EZV.H explicitly.

It is represented by chain 1KB9.f which is 100% sequence identical.

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Entity #7 | Chains F

Description: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN protein | Length: 125

No structure alignment results are available for 1EZV.F explicitly.

It is represented by chain 3CX5.g which is 100% sequence identical.

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Entity #8 | Chains G

Description: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX UBIQUINONE-BINDING PROTEIN QP-C protein | Length: 93

No structure alignment results are available for 1EZV.G explicitly.

It is represented by chain 3CX5.h which is 100% sequence identical.

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Entity #9 | Chains I

Description: UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 7.3 KD PROTEIN protein | Length: 55

No structure alignment results are available for 1EZV.I explicitly.

It is represented by chain 1KB9.i which is 100% sequence identical.

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References