1ETR

REFINED 2.3 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF BOVINE THROMBIN COMPLEXES FORMED WITH THE BENZAMIDINE AND ARGININE-BASED THROMBIN INHIBITORS NAPAP, 4-TAPAP AND MQPA: A STARTING POINT FOR IMPROVING ANTITHROMBOTICS


Structural Similarities for the Entities in PDB 1ETR

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains L

Description: EPSILON-THROMBIN protein | Length: 49

No structure alignment results are available for 1ETR.L explicitly.

It is represented by chain 3BEI.A which has more than 50% sequence identity.

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View how chain 1ETR.L compares with the representative chain PDP:3BEIA_. Select a comparison method:


Entity #2 | Chains H

Description: EPSILON-THROMBIN protein | Length: 259

No structure alignment results are available for 1ETR.H explicitly.

It is represented by chain 4I8H.A which has more than 70% sequence identity.

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References