Structural Similarities for the Entities in PDB 1DZ5

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Mar-28-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A protein | Length: 101

No structure alignment results are available for 1DZ5.A, 1DZ5.B explicitly.

These chains are represented by chain 1NU4.a which is 100% sequence identical.

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View how chain 1DZ5.B compares with the representative chain d1nu4a_. Select a comparison method:

Entity #2 | Chains C,D

Description: PIE, RNA (5'-R(*GP*AP*GP*AP*CP*AP*UP*UP*GP*CP*AP*CP*CP* CP*GP*GP*AP*GP*UP*CP*UP*C)-3') rna | Length: 22

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.