Structural Similarities for the Entities in PDB 1DFL

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: MYOSIN HEAD protein | Length: 831

No structure alignment results are available for 1DFL.A, 1DFL.B explicitly.

These chains are represented by chain 5I0H.A which has more than 40% sequence identity.

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View how chain 1DFL.B compares with the representative chain PDP:5I0HAa. Select a comparison method:


Entity #2 | Chains W,Y

Description: MYOSIN HEAD protein | Length: 139

No structure alignment results are available for 1DFL.W, 1DFL.Y explicitly.

These chains are represented by chain 1EXR.a which has more than 40% sequence identity.

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View how chain 1DFL.Y compares with the representative chain d1exra_. Select a comparison method:


Entity #3 | Chains X,Z

Description: MYOSIN HEAD protein | Length: 152

No structure alignment results are available for 1DFL.X, 1DFL.Z explicitly.

These chains are represented by chain 1EXR.a which has more than 40% sequence identity.

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View how chain 1DFL.Z compares with the representative chain d1exra_. Select a comparison method:


References