Structural Similarities for the Entities in PDB 1D2R

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-20-2017

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B,C,D,E,F

Description: PROTEIN (TRYPTOPHANYL TRNA SYNTHETASE) protein | Length: 326

No structure alignment results are available for 1D2R.A, 1D2R.B, 1D2R.C, 1D2R.D, 1D2R.E, 1D2R.F explicitly.

These chains are represented by chain 3SZ3.A which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 1D2R.F compares with the representative chain PDP:3SZ3Aa. Select a comparison method:


References