Structural Similarities for the Entities in PDB 1D0G

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jan-10-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains R,S,T

Description: DEATH RECEPTOR-5 protein | Length: 130

No structure alignment results are available for 1D0G.R, 1D0G.S, 1D0G.T explicitly.

These chains are represented by chain 3X3F.A which has more than 95% sequence identity.

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View how chain 1D0G.T compares with the representative chain PDP:3X3FAa. Select a comparison method:


Entity #2 | Chains A,B,D

Description: APOPTOSIS-2 LIGAND protein | Length: 168

No structure alignment results are available for 1D0G.A, 1D0G.B, 1D0G.D explicitly.

These chains are represented by chain 1DU3.d which is 100% sequence identical.

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View how chain 1D0G.D compares with the representative chain d1du3d_. Select a comparison method:


References