1D0E

CRYSTAL STRUCTURES OF THE N-TERMINAL FRAGMENT FROM MOLONEY MURINE LEUKEMIA VIRUS REVERSE TRANSCRIPTASE COMPLEXED WITH NUCLEIC ACID: FUNCTIONAL IMPLICATIONS FOR TEMPLATE-PRIMER BINDING TO THE FINGERS DOMAIN


Structural Similarities for the Entities in PDB 1D0E

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains E,F

Description: 5'-D(*TP*TP*TP*CP*AP*TP*GP*CP*AP*TP*G)-3' dna | Length: 11

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


Entity #2 | Chains A,B

Description: REVERSE TRANSCRIPTASE protein | Length: 259

No structure alignment results are available for 1D0E.A, 1D0E.B explicitly.

These chains are represented by chain 4XPC.A which is 100% sequence identical.

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View how chain 1D0E.B compares with the representative chain PDP:4XPCAa. Select a comparison method:


References