Structural Similarities for the Entities in PDB 1CKB

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Mar-28-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: C-CRK N-TERMINAL SH3 DOMAIN protein | Length: 57

No structure alignment results are available for 1CKB.A explicitly.

It is represented by chain 1CKA.a which is 100% sequence identical.

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View how chain 1CKB.A compares with the representative chain d1ckaa_. Select a comparison method:

Entity #2 | Chains B

Description: SOS PEPTIDE (PRO-PRO-PRO-VAL-PRO-PRO-ARG-ARG-ARG-ARG) protein | Length: 10

This entity is too short to be considered for the all vs. all structure alignments.