Structural Similarities for the Entities in PDB 1CHP

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Feb-21-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains D,E,F,G,H

Description: CHOLERA TOXIN B PENTAMER protein | Length: 103

No structure alignment results are available for 1CHP.D, 1CHP.E, 1CHP.F, 1CHP.G, 1CHP.H explicitly.

These chains are represented by chain 5ELB.A which has more than 95% sequence identity.

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View how chain 1CHP.H compares with the representative chain PDP:5ELBAa. Select a comparison method:


References