1CDK

CAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT (E.C.2.7.1.37) (PROTEIN KINASE A) COMPLEXED WITH PROTEIN KINASE INHIBITOR PEPTIDE FRAGMENT 5-24 (PKI(5-24) ISOELECTRIC VARIANT CA) AND MN2+ ADENYLYL IMIDODIPHOSPHATE (MNAMP-PNP) AT PH 5.6 AND 7C AND 4C


Structural Similarities for the Entities in PDB 1CDK

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-13-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,B

Description: CAMP-DEPENDENT PROTEIN KINASE protein | Length: 350

No structure alignment results are available for 1CDK.A, 1CDK.B explicitly.

These chains are represented by chain 4WIH.A which has more than 95% sequence identity.

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View how chain 1CDK.B compares with the representative chain PDP:4WIHAa. Select a comparison method:


Entity #2 | Chains I,J

Description: PROTEIN KINASE INHIBITOR protein | Length: 20

No structure alignment results are available for 1CDK.I, 1CDK.J explicitly.

These chains are represented by chain 1RDQ.I which is 100% sequence identical.

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View how chain 1CDK.J compares with the representative chain PDP:1RDQI_. Select a comparison method:


References