Structural Similarities for the Entities in PDB 1CC0

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: May-24-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C

Description: transforming protein rhoA protein | Length: 190

No structure alignment results are available for 1CC0.A, 1CC0.C explicitly.

These chains are represented by chain 1MH1.a which has more than 50% sequence identity.

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View how chain 1CC0.C compares with the representative chain d1mh1a_. Select a comparison method:


Entity #2 | Chains E,F

Description: rho GDP dissociation inhibitor alpha protein | Length: 204

No structure alignment results are available for 1CC0.E, 1CC0.F explicitly.

These chains are represented by chain 5FR1.B which has more than 95% sequence identity.

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View how chain 1CC0.F compares with the representative chain PDP:5FR1Ba. Select a comparison method:


References