Structural Similarities for the Entities in PDB 1BXR

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Jun-13-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,C,E,G

Description: CARBAMOYL-PHOSPHATE SYNTHASE protein | Length: 1073

No structure alignment results are available for 1BXR.A, 1BXR.C, 1BXR.E, 1BXR.G explicitly.

These chains are represented by chain 1A9X.a which has more than 95% sequence identity.

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View how chain 1BXR.G compares with the representative chain d1a9xa1. Select a comparison method:


Entity #2 | Chains B,D,F,H

Description: CARBAMOYL-PHOSPHATE SYNTHASE protein | Length: 382

No structure alignment results are available for 1BXR.B, 1BXR.D, 1BXR.F, 1BXR.H explicitly.

These chains are represented by chain 1A9X.b which has more than 95% sequence identity.

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View how chain 1BXR.H compares with the representative chain d1a9xb1. Select a comparison method:


References