Structural Similarities for the Entities in PDB 1BRN

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

Info & Help Documentation

A detailed description of the procedure for the all vs. all alignments is available.

You can also use the structure comparison tool to compare any 2 given structures

Entity #1 | Chains A,B

Description: DNA (5'-D(*CP*GP*AP*C)-3') dna | Length: 4

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.

Entity #2 | Chains L,M

Description: PROTEIN (BARNASE (E.C.3.1.27.-)) protein | Length: 110

No structure alignment results are available for 1BRN.L, 1BRN.M explicitly.

These chains are represented by chain 1A2P.a which is 100% sequence identical.

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View how chain 1BRN.M compares with the representative chain d1a2pa_. Select a comparison method: