Structural Similarities for the Entities in PDB 1BGY

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

Info & Help Documentation



A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A,M

Description: CYTOCHROME BC1 COMPLEX protein | Length: 446

No structure alignment results are available for 1BGY.A, 1BGY.M explicitly.

These chains are represented by chain 2A06.a which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1BGY.M compares with the representative chain d2a06a1. Select a comparison method:


Entity #10 | Chains J,V

Description: CYTOCHROME BC1 COMPLEX protein | Length: 62

No structure alignment results are available for 1BGY.J, 1BGY.V explicitly.

These chains are represented by chain 2A06.J which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1BGY.V compares with the representative chain PDP:2A06J_. Select a comparison method:


Entity #11 | Chains K,W

Description: CYTOCHROME BC1 COMPLEX protein | Length: 56

No structure alignment results are available for 1BGY.K, 1BGY.W explicitly.

These chains are represented by chain 2FYU.k which has more than 95% sequence identity.

Show structure comparison results

  Loading...

View how chain 1BGY.W compares with the representative chain d2fyuk1. Select a comparison method:


Entity #2 | Chains B,N

Description: CYTOCHROME BC1 COMPLEX protein | Length: 439

No structure alignment results are available for 1BGY.B, 1BGY.N explicitly.

These chains are represented by chain 2A06.b which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1BGY.N compares with the representative chain d2a06b1. Select a comparison method:


Entity #3 | Chains C,O

Description: CYTOCHROME BC1 COMPLEX protein | Length: 379

No structure alignment results are available for 1BGY.C, 1BGY.O explicitly.

These chains are represented by chain 3CX5.c which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 1BGY.O compares with the representative chain d3cx5c1. Select a comparison method:


Entity #4 | Chains D,P

Description: CYTOCHROME BC1 COMPLEX protein | Length: 241

No structure alignment results are available for 1BGY.D, 1BGY.P explicitly.

These chains are represented by chain 3CX5.d which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 1BGY.P compares with the representative chain d3cx5d1. Select a comparison method:


Entity #5 | Chains E,Q

Description: CYTOCHROME BC1 COMPLEX protein | Length: 196

No structure alignment results are available for 1BGY.E, 1BGY.Q explicitly.

These chains are represented by chain 3CX5.e which has more than 50% sequence identity.

Show structure comparison results

  Loading...

View how chain 1BGY.Q compares with the representative chain d3cx5e1. Select a comparison method:


Entity #6 | Chains F,R

Description: CYTOCHROME BC1 COMPLEX protein | Length: 110

No structure alignment results are available for 1BGY.F, 1BGY.R explicitly.

These chains are represented by chain 2A06.f which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1BGY.R compares with the representative chain d2a06f1. Select a comparison method:


Entity #7 | Chains G,S

Description: CYTOCHROME BC1 COMPLEX protein | Length: 81

No structure alignment results are available for 1BGY.G, 1BGY.S explicitly.

These chains are represented by chain 2A06.g which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1BGY.S compares with the representative chain d2a06g1. Select a comparison method:


Entity #8 | Chains H,T

Description: CYTOCHROME BC1 COMPLEX protein | Length: 78

No structure alignment results are available for 1BGY.H, 1BGY.T explicitly.

These chains are represented by chain 2A06.h which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1BGY.T compares with the representative chain d2a06h1. Select a comparison method:


Entity #9 | Chains I,U

Description: CYTOCHROME BC1 COMPLEX protein | Length: 78

No structure alignment results are available for 1BGY.I, 1BGY.U explicitly.

These chains are represented by chain 2A06.I which is 100% sequence identical.

Show structure comparison results

  Loading...

View how chain 1BGY.U compares with the representative chain PDP:2A06Ia. Select a comparison method:


References