Structural Similarities for the Entities in PDB 1BCC

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2017

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: UBIQUINOL CYTOCHROME C OXIDOREDUCTASE protein | Length: 446

No structure alignment results are available for 1BCC.A explicitly.

It is represented by chain 2A06.a which has more than 70% sequence identity.

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View how chain 1BCC.A compares with the representative chain d2a06a1. Select a comparison method:


Entity #10 | Chains J

Description: UBIQUINOL CYTOCHROME C OXIDOREDUCTASE protein | Length: 62

No structure alignment results are available for 1BCC.J explicitly.

It is represented by chain 2A06.J which has more than 95% sequence identity.

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Entity #2 | Chains B

Description: UBIQUINOL CYTOCHROME C OXIDOREDUCTASE protein | Length: 422

No structure alignment results are available for 1BCC.B explicitly.

It is represented by chain 2A06.b which has more than 90% sequence identity.

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Entity #3 | Chains C

Description: UBIQUINOL CYTOCHROME C OXIDOREDUCTASE protein | Length: 380

No structure alignment results are available for 1BCC.C explicitly.

It is represented by chain 3CX5.c which has more than 50% sequence identity.

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Entity #4 | Chains D

Description: UBIQUINOL CYTOCHROME C OXIDOREDUCTASE protein | Length: 241

No structure alignment results are available for 1BCC.D explicitly.

It is represented by chain 3CX5.d which has more than 50% sequence identity.

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Entity #5 | Chains E

Description: UBIQUINOL CYTOCHROME C OXIDOREDUCTASE protein | Length: 196

No structure alignment results are available for 1BCC.E explicitly.

It is represented by chain 3CX5.e which has more than 50% sequence identity.

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Entity #6 | Chains F

Description: UBIQUINOL CYTOCHROME C OXIDOREDUCTASE protein | Length: 109

No structure alignment results are available for 1BCC.F explicitly.

It is represented by chain 2A06.f which has more than 90% sequence identity.

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Entity #7 | Chains G

Description: UBIQUINOL CYTOCHROME C OXIDOREDUCTASE protein | Length: 81

No structure alignment results are available for 1BCC.G explicitly.

It is represented by chain 2A06.g which has more than 90% sequence identity.

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Entity #8 | Chains H

Description: UBIQUINOL CYTOCHROME C OXIDOREDUCTASE protein | Length: 78

No structure alignment results are available for 1BCC.H explicitly.

It is represented by chain 2A06.h which has more than 95% sequence identity.

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Entity #9 | Chains I

Description: UBIQUINOL CYTOCHROME C OXIDOREDUCTASE protein | Length: 33

References