Structural Similarities for the Entities in PDB 1AUS

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Nov-29-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains L,M,N,O

Description: RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE protein | Length: 475

No structure alignment results are available for 1AUS.L, 1AUS.M, 1AUS.N, 1AUS.O explicitly.

These chains are represented by chain 1WDD.a which has more than 90% sequence identity.

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View how chain 1AUS.O compares with the representative chain d1wdda1. Select a comparison method:


Entity #2 | Chains S,T,U,V

Description: RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE protein | Length: 123

No structure alignment results are available for 1AUS.S, 1AUS.T, 1AUS.U, 1AUS.V explicitly.

These chains are represented by chain 1WDD.s which has more than 70% sequence identity.

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View how chain 1AUS.V compares with the representative chain d1wdds_. Select a comparison method:


References