Structural Similarities for the Entities in PDB 1A02

The following structural similarities have been found using the jFATCAT-rigid algorithm [1,2].

To reduce the number of hits, a 40% sequence identity clustering has been applied and a representative chain taken from each cluster. If the representative chain consists of multiple domains, each domain is included in the search. If available, the SCOP 1.75 domain assignment [3] is used. Otherwise algorithmic domain assignments are computed using the ProteinDomainParser [4].

Currently viewing only significant results (P-value < 0.001). Show all available results.

Cluster data are up-to-date as of: Sep-27-2016

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A detailed description of the procedure for the all vs. all alignments is available.

Entity #1 | Chains A

Description: DNA (5'-D(*DTP*DTP*DGP*DGP*DAP*DAP*DAP*DAP*DTP*DTP*DTP*DGP*DTP*DTP*DTP*DCP*DAP*DTP*DAP*DG)-3') dna | Length: 20

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


Entity #2 | Chains B

Description: DNA (5'-D(*DAP*DAP*DCP*DTP*DAP*DTP*DGP*DAP*DAP*DAP*DCP*DAP*DAP*DAP*DTP*DTP*DTP*DTP*DCP*DC)-3') dna | Length: 20

This entity is NOT a polypeptide entity and therefore cannot be considered for the all vs. all structure alignments.


Entity #3 | Chains N

Description: NUCLEAR FACTOR OF ACTIVATED T CELLS protein | Length: 301

No structure alignment results are available for 1A02.N explicitly.

It is represented by chain 1P7H.l which is 100% sequence identical.

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View how chain 1A02.N compares with the representative chain d1p7hl1. Select a comparison method:


Entity #4 | Chains F

Description: AP-1 FRAGMENT FOS protein | Length: 56

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Entity #5 | Chains J

Description: AP-1 FRAGMENT JUN protein | Length: 56

No structure alignment results are available for 1A02.J explicitly.

It is represented by chain 2DGC.a which has more than 40% sequence identity.

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View how chain 1A02.J compares with the representative chain d2dgca_. Select a comparison method:


References