Sequence Similarity Clusters for the Entities in PDB 9ICF

Entity #1 | Chains: T
DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
DNA (5'-D(*TP*CP*TP*AP*AP*TP*GP*A)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)) protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 263 324 91
95 % 288 358 78 Flexibility: Low
Max RMSD: 14.0, Avg RMSD: 2.9
PDBFlex
90 % 288 358 84
70 % 288 358 107
50 % 288 358 137
40 % 288 358 154
30 % 400 488 114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures