Sequence Similarity Clusters for the Entities in PDB 8ICQ

Entity #1 | Chains: T
DNA (5'-D(*CP*AP*TP*TP*AP*GP*AP*A)-3') dna, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
DNA (5'-D(*TP*CP*TP*AP*AP*TP*G)-3') dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7)) protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 212 280 79
95 % 244 322 79
90 % 244 322 83
70 % 244 322 98
50 % 244 322 136
40 % 244 322 152
30 % 355 452 108

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures