Sequence Similarity Clusters for the Entities in PDB 7MHT

Entity #1 | Chains: C
5'-D(P*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
5'-D(P*CP*CP*AP*TP*GP*AP*GP*CP*TP*GP*AP*C)-3' dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 29 1657
95 % 17 31 1798 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 17 31 1838
70 % 17 31 1853
50 % 17 31 1895
40 % 17 31 1873
30 % 18 33 1551

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures