Sequence Similarity Clusters for the Entities in PDB 7ICE

Entity #1 | Chains: T
DNA (5'-D(*CP*AP*TP*CP*TP*GP*T)-3') dna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: P
DNA (5'-D(P*CP*AP*GP*AP*TP*G)-3') dna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
PROTEIN (DNA POLYMERASE BETA) protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 203 314 90
95 % 225 346 73 Flexibility: Medium
Max RMSD: 14.0, Avg RMSD: 3.0
PDBFlex
90 % 225 346 80
70 % 225 346 100
50 % 225 346 132
40 % 225 346 150
30 % 325 476 115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures