Sequence Similarity Clusters for the Entities in PDB 6MHT

Entity #1 | Chains: C
DNA (5'-D(P*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: D
DNA (5'-D(P*GP*TP*CP*AP*GP*(4SC)P*GP*CP*AP*TP*GP*G)-3') dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 29 1684
95 % 7 31 1817 Flexibility: Low
Max RMSD: 4.0, Avg RMSD: 1.1
PDBFlex
90 % 7 31 1855
70 % 7 31 1868
50 % 7 31 1912
40 % 7 31 1890
30 % 7 33 1565

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures