Sequence Similarity Clusters for the Entities in PDB 6LDH

Entity #1 | Chains: A
M4 APO-LACTATE DEHYDROGENASE protein, length: 330 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 25662
95 % 2 3 21580 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 1.2
PDBFlex
90 % 2 3 20976
70 % 23 52 163
50 % 23 52 191
40 % 79 160 65
30 % 107 220 39

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.