Sequence Similarity Clusters for the Entities in PDB 6ILL

Entity #1 | Chains: A
Capsid protein VP1 protein, length: 273 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 16495
95 % 1 6 14843
90 % 1 6 14617
70 % 8 16 5184
50 % 11 29 859
40 % 61 132 371
30 % 98 215 214
Entity #2 | Chains: B
Capsid protein VP2 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 13185
95 % 1 7 12390
90 % 1 7 12198
70 % 11 31 805
50 % 91 213 200
40 % 91 213 214
30 % 96 226 217
Entity #3 | Chains: C
Capsid protein VP3 protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 14863
95 % 1 7 12926
90 % 1 7 12764
70 % 11 31 811
50 % 8 23 949
40 % 100 227 192
30 % 100 227 201
Entity #4 | Chains: D
Capsid protein VP4 protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 38327
95 % 3 8 9982
90 % 10 20 3984
70 % 42 96 644
50 % 76 148 430
40 % 76 148 449
30 % 76 148 464

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1D4M 2 2 PROTEIN (COXSACKIEVIRUS A9) VP2 138949
2 1H8T 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
3 1OOP 2 B Coat protein VP2 138949
4 1MQT 2 B Polyprotein Capsid Protein SVDV COAT PROTEIN VP2 138949
5 4GB3 2 2 coat protein 2 UNP residues 70-332 138949
6 2X5I 2 B VP2 138949
7 1COV 2 2 COXSACKIEVIRUS COAT PROTEIN 138949
8 1EV1 2 2 ECHOVIRUS 1 VP1, VP2, VP3, VP4 138949
9 6RJF 2 2 VP2 138949
10 6O06 2 B VP2 UNP residues 77-330 138949
11 6ILL 2 B Capsid protein VP2 138949
12 6ILM 2 B Capsid protein VP2 138949
13 6ILN 2 B Capsid protein VP2 138949
14 6ILO 2 B Capsid protein VP2 138949
15 6ILP 2 B Capsid protein VP2 138949
16 6ILJ 2 B Capsid protein VP2 138949
17 6ILK 2 B Capsid protein VP2 138949
18 6HHT 2 B1, B2, E1, E2, H1, H2, K1, K2, N1, N2, Q1, Q2, T1, T2, W1, W2, Z2, c2, f2, i2, l2, o2, r2, u2, x2 Echovirus 18 capsid protein 2 138949
19 6HBG 2 B Echovirus 18 viral protein 2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
20 6HBH 2 B Echovirus 18 capsid protein 2 138949
21 6HBJ 2 B Viral protein 2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
22 6HBK 3 B, E, H, K, N, Q, T, W, Z, c, f Echovirus 18 capsid protein 3 138949
23 6HBL 2 B, E, H, K, N, Q, T, W, Z, c, f, i, l, o, r Echovirus 18 capsid protein 2 138949
24 6GZV 2 B Capsid protein VP2 138949 2.7.7.48 | Details 3.4.22.28 | Details 3.4.22.29 | Details 3.6.1.15 | Details
25 3JD7 2 2 Capsid protein VP2 UNP residues 70-332 138949
26 3J2J 3 C Protein VP2 UNP residues 79-330 138949
27 3IYP 3 C Polyprotein 138949
28 2C8I 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
29 1UPN 2 B ECHOVIRUS 11 COAT PROTEIN VP2 138949
30 1M11 3 2 COAT PROTEIN VP2 138949
31 1JEW 3 2 COXSACKIEVIRUS CAPSID, COAT PROTEIN VP2 Residues 70-332 138949