Sequence Similarity Clusters for the Entities in PDB 5PEP

Entity #1 | Chains: A
PEPSIN protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54127
95 % 3 6 10053 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 3 6 9941
70 % 8 11 5383
50 % 17 22 2443
40 % 47 111 250
30 % 619 712 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.