Sequence Similarity Clusters for the Entities in PDB 5PEP

Entity #1 | Chains: A
PEPSIN protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 11401
95 % 3 6 11437 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 3 6 11274
70 % 8 11 6117
50 % 17 22 2713
40 % 53 128 234
30 % 632 738 30

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures