Sequence Similarity Clusters for the Entities in PDB 5PEP

Entity #1 | Chains: A
PEPSIN protein, length: 326 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 53310
95 % 3 6 9870 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 3 6 9758
70 % 8 11 5266
50 % 17 22 2380
40 % 46 110 251
30 % 614 707 28

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.