Sequence Similarity Clusters for the Entities in PDB 5ELS

Entity #1 | Chains: A,B,C,D,E,F
KH domain-containing, RNA-binding, signal transduction-associated protein 3 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 6750
95 % 2 2 7329 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.1
PDBFlex
90 % 2 2 7280
70 % 2 2 7097
50 % 2 2 6537
40 % 2 2 6091
30 % 2 2 5447
Entity #2 | Chains: H,I
RNA (5'-R(P*AP*AP*AP*UP*AP*A)-3') rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.