Sequence Similarity Clusters for the Entities in PDB 5ABY

Entity #1 | Chains: A,C,E
EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-3 protein, length: 190 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22179
95 % 2 2 19163
90 % 2 2 18666
70 % 2 4 11847
50 % 11 35 674
40 % 11 40 566
30 % 12 48 498
Entity #2 | Chains: B,D,F
4E-BINDING PROTEIN MEXTLI protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25007
95 % 2 2 21328
90 % 2 2 20719
70 % 2 2 19030
50 % 2 2 16532
40 % 2 2 14744
30 % 2 2 12633

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures