Sequence Similarity Clusters for the Entities in PDB 4Z77

Entity #1 | Chains: A,D
H-2 class I histocompatibility antigen, K-D alpha chain protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 3263
95 % 3 13 3004 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 3 13 3104
70 % 247 791 6
50 % 247 796 8
40 % 256 840 9
30 % 256 863 12
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 234 685 2
95 % 258 734 3 Flexibility: Low
Max RMSD: 22.2, Avg RMSD: 0.9
PDBFlex
90 % 261 748 3
70 % 300 1039 4
50 % 305 1063 4
40 % 305 1063 4
30 % 305 1063 7
Entity #3 | Chains: C,F
Insulin protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures