Sequence Similarity Clusters for the Entities in PDB 4UN3

Entity #1 | Chains: A
SGRNA rna, length: 83 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1 protein, length: 1372 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50620
95 % 11 20 2355 Flexibility: High
Max RMSD: 32.8, Avg RMSD: 13.5
PDBFlex
90 % 11 20 2421
70 % 11 20 2422
50 % 11 20 2405
40 % 11 20 2381
30 % 11 20 2267
Entity #3 | Chains: C
TARGET DNA STRAND dna, length: 28 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: D
NON-TARGET DNA STRAND dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures