Sequence Similarity Clusters for the Entities in PDB 4TPI

Entity #1 | Chains: Z
TRYPSINOGEN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 359 389 34
95 % 410 448 33 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 410 448 34
70 % 466 532 18
50 % 541 683 14
40 % 1173 1695 4
30 % 1262 1845 6
Entity #2 | Chains: I
BOVINE PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 72893
95 % 61 90 245 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 66 95 248
70 % 82 115 174
50 % 94 148 176
40 % 97 162 176
30 % 97 162 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.