Sequence Similarity Clusters for the Entities in PDB 4TPI

Entity #1 | Chains: Z
TRYPSINOGEN protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 371 403 27
95 % 422 462 20 Flexibility: No
Max RMSD: 3.0, Avg RMSD: 0.5
PDBFlex
90 % 422 462 21
70 % 478 546 19
50 % 553 697 14
40 % 1189 1719 4
30 % 1278 1869 6
Entity #2 | Chains: I
BOVINE PANCREATIC TRYPSIN INHIBITOR protein, length: 58 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 73840
95 % 61 90 255 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 0.7
PDBFlex
90 % 66 95 260
70 % 82 115 177
50 % 94 149 182
40 % 97 163 178
30 % 97 163 189

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures